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	<title>Proslogion</title>
	<atom:link href="http://blog.drwile.com/?feed=rss2" rel="self" type="application/rss+xml" />
	<link>http://blog.drwile.com</link>
	<description>Thoughts from a scientist who is a Christian (not a Christian Scientist)</description>
	<lastBuildDate>Mon, 20 May 2013 13:37:19 +0000</lastBuildDate>
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		<title>Scientific Fraud: A Surprising Study</title>
		<link>http://blog.drwile.com/?p=10426</link>
		<comments>http://blog.drwile.com/?p=10426#comments</comments>
		<pubDate>Mon, 20 May 2013 13:36:24 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Modern Science]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10426</guid>
		<description><![CDATA[Dr. Arturo Casadevall is the chair and professor of microbiology and immunology at Albert Einstein College of Medicine. He is also the editor-in-chief of mBio, an open-access, online scientific journal that is sponsored by the American Society for Microbiology. Because of this latter position, he is very concerned about fraud in the scientific community. As [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10427" class="wp-caption alignleft" style="width: 250px"><a href="http://www.eurekalert.org/multimedia/pub/17474.php?from=146728"><img src="http://blog.drwile.com/wp-content/uploads/2013/05/Arturo_Casadevall.jpg" alt="" title="Arturo_Casadevall" width="240" height="295" class="size-full wp-image-10427" /></a><p class="wp-caption-text">Dr. Arturo Casadevall, chair and professor of microbiology and immunology at Albert Einstein College of Medicine (Click for credit)</p></div><span style="line-height: 140%;">Dr. Arturo Casadevall is the chair and professor of microbiology and immunology at Albert Einstein College of Medicine.  He is also the editor-in-chief of <em>mBio</em>, an open-access, online scientific journal that is sponsored by the American Society for Microbiology.  Because of this latter position, he is very concerned about fraud in the scientific community.  As a result, he and his colleagues decided to perform a study that would aid in our understanding of what causes scientific papers to be retracted and what kinds of people are doing the retracting.  The results were not encouraging.</p>
<p>First, he and his colleagues studied all the retracted articles indexed by <a href="http://www.ncbi.nlm.nih.gov/pubmed">PubMed</a> as of May 3, 2012.  In all, there were 2,047 retracted papers, and according to their results, most of them were retracted because of some form of &#8220;misconduct.&#8221;  Furthermore, the most likely form of misconduct was either fraud or suspected fraud.  They also noted the following:<a name="f1"></a><a href="#r1"><sup>1</sup></a></p>
<blockquote><p>
&#8230;the incidence of retractions due to fraud is increasing, a trend that should be concerning to scientists and nonscientists alike.
</p></blockquote>
<p>So according to their analysis, fraud is the leading cause of scientific articles being retracted, and it is on the rise.  As they note, this is a cause for great concern.</p>
<p>In order to understand more about the kinds of scientists who are committing fraud, the authors decided to do an extensive analysis of some individual cases.  Specifically, they reviewed findings of misconduct that were published by the <a href="http://ori.hhs.gov/">U.S. Office of Research Integrity</a>.  There were 228 individuals whose cases of misconduct had been filed, and nearly all of them (215 to be exact) were instances of fraud.  When the authors of the study analyzed who was committing this fraud, they found some shocking results.</p>
<p><span id="more-10426"></span></p>
<p>If you had asked me before I read the study who commits the most scientific fraud, I would have said it was graduate students.  After all, graduate students are focused on getting their degree, so I would think they would be more likely to &#8220;cut corners&#8221; when it comes to doing scientific research.  Also, I would have thought that graduate students were the least likely to worry about the future of their field, since they hadn&#8217;t yet invested much of their lives in it.  The results of the study, however, show that my answer would have been <em>completely wrong</em>.  In fact, students were the least likely to be the ones committing the fraud!  Postdoctoral research fellows (those who have a PhD but do not have a faculty position) were more likely to commit fraud than the students, but <em>the most likely people to commit fraud were the professors</em> (those who held a faculty position)!</p>
<p>So contrary to my initial thoughts, the higher a person&#8217;s scientific position, the more likely he or she is to commit fraud!  Speaking of &#8220;he or she,&#8221; the other major finding of the study was that the majority of those committing fraud are male.  Consider, for example, the professors committing fraud.  Men accounted for 88% of those cases, while women accounted for only 12%.  Now there are more male science professors than female, but not by that much.  <a href="http://www.nsf.gov/statistics/infbrief/nsf11320/">Females represent about 32% of science faculty members</a>, so if the women had been committing fraud as much as the men, there would have been roughly three times as many cases of fraud among the female professors.</p>
<p>What&#8217;s causing all this fraud?  The authors give one possible explanation:</p>
<blockquote><p>
The predominant economic system in science is &#8220;winner-take-all.&#8221; Such a reward system has the benefit of promoting competition and the open communication of new discoveries but has many perverse effects on the scientific enterprise. The scientific misconduct among both male and female scientists observed in this study may well reflect a darker side of competition in science.
</p></blockquote>
<p>However, I will offer a possible explanation that was not discussed in the study.  At one time, most of the people practicing science were committed Christians.  They viewed their science not just as a job or a way of discovering more about nature.  Instead, they looked at it as a way of learning more about God.  Consider, for example, the words of <a href="http://www.answersingenesis.org/articles/cm/v15/n2/james-joule">James Prescott Joule</a>,  one of the greatest scientists who has ever lived:<a name="f2"></a><a href="#r2"><sup>2</sup></a></p>
<blockquote><p>
After the knowledge of, and obedience to, the will of God, the next aim must be to know something of His attributes of wisdom, power and goodness as evidenced by His handiwork&#8230;It is evident that an acquaintance with natural laws means no less than an acquaintance with the mind of God therein expressed.
</p></blockquote>
<p>When a scientist views his or her work as a mission to learn more about the mind of God, I think the scientist will treat it with more reverence.  Does that mean no scientist who is a Christian will commit scientific fraud?  Of course not!  I know some Christians who are truly despicable people.  I am sure that some of the scientists who are committing fraud are Christians.  Does it mean that all scientists who are atheists will commit fraud?  Of course not!  I know many atheists who are significantly more ethical and moral than some of the Christians I know.  I personally know many atheist scientists who are doing excellent scientific work with no hint of moral or ethical stain.</p>
<p>All I am saying is that those scientists who view their work as <em>a job</em> are significantly more likely to be willing to &#8220;cut corners,&#8221; including the ethical and moral ones, to get the job done.  Those who view their work as more of <em>a mission</em> will be less likely to do so.  In my opinion, if we want to cut back on scientific fraud, we have to train and produce scientists who view their work as a mission, not a job.  </p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1.  Ferric C. Fang, Joan W. Bennett, and Arturo Casadevall, &#8220;Males Are Overrepresented among Life Science Researchers Committing Scientific Misconduct,&#8221; <em>mBio</em> <strong>4(1)</strong>:e00640-12, 2013 (<a href="http://mbio.asm.org/content/4/1/e00640-12.full?sid=d0c25275-d11e-490d-99c8-266e76d536f4">Available online</a>)<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2.  Clifford Pickover, <em>Archimedes to Hawking:Laws of Science and the Great Minds Behind Them</em>, Oxford University Press 2008, p. 306<br />
<a href="#f2">Return to Text</a></p>
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		<title>Exactly How &#8220;Green&#8221; are Wind Turbines?</title>
		<link>http://blog.drwile.com/?p=10409</link>
		<comments>http://blog.drwile.com/?p=10409#comments</comments>
		<pubDate>Wed, 15 May 2013 14:44:22 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Global Warming]]></category>
		<category><![CDATA[Modern Science]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10409</guid>
		<description><![CDATA[Using the wind to produce energy is considered by many to be an environmental panacea. Consider the words of Greg Vitali, a member of the Pennsylvania House of Representatives: Wind energy is better for the environment than coal, natural gas or nuclear energy. Wind turbines operate pollution free, do not add to climate change and [...]]]></description>
			<content:encoded><![CDATA[<p><iframe width="560" height="315" src="http://www.youtube.com/embed/8NAAzBArYdw" frameborder="0" allowfullscreen></iframe></p>
<p>Using the wind to produce energy is considered by many to be an environmental panacea.  Consider <a href="http://thetimes-tribune.com/opinion/editorials-columns/guest-columnists/tax-credit-crucial-to-wind-energy-development-1.1369754">the words of Greg Vitali</a>, a member of the Pennsylvania House of Representatives:</p>
<blockquote><p>
Wind energy is better for the environment than coal, natural gas or nuclear energy. Wind turbines operate pollution free, do not add to climate change and use very little water.
</p></blockquote>
<p>At first glance, this sounds reasonable.  After all, wind turbines don&#8217;t emit carbon dioxide, so they are not contributing to the horrible &#8220;global warming&#8221; that is supposed to happen this century.  They also don&#8217;t seem to consume much.  They just sit there, twirling in the breeze, making electricity for us to use.  It&#8217;s not surprising, then, that wind power is the <a href="http://www.eia.gov/cneaf/solar.renewables/page/wind/wind.html">fastest-growing source of new electrical power in the U.S.</a></p>
<p>As the video above shows, however, wind turbines do have an environmental impact &#8211; they can kill flying animals.  Of course, a video of one or two birds being knocked out of the air by a wind turbine is no cause for alarm.  The real question is, &#8220;How often does this happen?&#8221;  If a few hundred birds are killed each year by wind turbines, you can legitimately say that their impact on bird populations is relatively low.  However, a recent study indicates that more than just a few hundred birds are being killed each year by the turbines that produce wind power.</p>
<p><span id="more-10409"></span></p>
<p>Dr. K. Shawn Smallwood, an ecologist at the University of California, Davis, reviewed bird fatality reports from wind farms across North America.  He then developed a model that would help him estimate the number of bird deaths that would occur each year as a result of wind turbines. His results were stunning.  Using the amount of wind power produced in the U.S. in 2012 as his benchmark, he estimated that <em>573,000 birds would be killed by wind turbines each year</em>!  83,000 of those birds would be raptors, which includes endangered or threatened species like the the California Condor and the Northern Spotted Owl.<a name="f1"></a><a href="#r1"><sup>1</sup></a> To me, those numbers are staggering, and since wind power is growing quickly, they will probably increase significantly over the next few years.  </p>
<p>Dr. Smallwood&#8217;s paper also estimates the number of bats that will be killed by wind turbines, and those numbers are equally alarming.  He estimates that 888,000 bats will die from wind turbines every year.  This is especially troubling, because there are many endangered bat species.  Ironically, the <em>Atlanta Journal-Constitution</em> reports that <a href="http://www.myajc.com/news/news/transportation/endangered-bat-to-delay-dot-projects/nWzdR/?icmp=ajc_internallink_textlink_apr2013_ajcstubtomyajc_launch">a single Indiana bat (which is endangered) found in Georgia has caused the delay of $459 million worth of road work</a>, but no wind turbine installations are being delayed over worries about endangered bats!</p>
<p>While it was not surprising to me that birds are killed by wind turbines, I found it odd that bats can be killed by them.  After all, <a href="http://creation.com/bats-sophistication-in-miniature">bats have a sophisticated sonar system that puts the best human technology to shame</a>.  With their sonar, they should have no problem avoiding the rotating blades of a wind turbine.  However, according to a study that was done five years ago, a large number of the bat fatalities associated with wind turbines seems to be the result of the low-pressure zones that form near the turbines.<a name="f2"></a><a href="#r2"><sup>2</sup></a>  </p>
<p>While the bats can detect the turning blades of a wind turbine with their sonar, they cannot detect the fact that there is a lack of air near them.  As the bat flies near the turbines, it flies into a low-pressure zone, which causes trauma to the lungs.  This trauma, usually called <strong>barotrauma</strong>, ruptures the capillaries in the lungs, resulting in internal bleeding.  In the study, the authors found that 90% of the dead bats they examined showed signs of this kind of trauma.</p>
<p>Now please don&#8217;t get me wrong.  I am not saying that wind power is bad for the environment.  I have no idea, since Dr. Smallwood&#8217;s study is the first one I have seen that tries to estimate the total amount of animal deaths caused each year by such turbines.  It&#8217;s possible, of course, that his model is wrong.  It&#8217;s also possible that based on our growing knowledge of the interactions between birds, bats, and wind turbines, we can produce something that makes the wind turbines less deadly to flying animals.  </p>
<p>My point is that environmental issues are not as simple as they seem.  At first glance, it seems obvious that wind power is an environmentally-friendly way to produce electricity.  It doesn&#8217;t emit pollution, it doesn&#8217;t consume many resources, and it doesn&#8217;t produce harmful byproducts.  It also doesn&#8217;t contribute to &#8220;global warming,&#8221; or &#8220;climate change&#8221; as it is now known.  However, it does slaughter a lot of birds and bats every year.  Until some detailed analyses are done to determine whether or not the positive aspects of wind power outweigh the negative ones, it is clear that we should move more slowly when it comes to large-scale implementation of this supposedly &#8220;green&#8221; power source.</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1.  K. Shawn Smallwood, &#8220;Comparing bird and bat fatality-rate estimates among North American wind-energy projects,&#8221; <em>Wildlife Society Bulletin</em> <strong>37(1)</strong>:19–33, 2013<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2.  Erin F. Baerwald, Genevieve H. D&#8217;Amours, Brandon J. Klug, and Robert M.R. Barclay, &#8220;Barotrauma is a significant cause of bat fatalities at wind turbines,&#8221; <em>Current Biology</em> <strong>18(16)</strong>:R695-R696, 2008<br />
<a href="#f2">Return to Text</a></p>
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		<title>A Mother&#8217;s Day Drama</title>
		<link>http://blog.drwile.com/?p=10389</link>
		<comments>http://blog.drwile.com/?p=10389#comments</comments>
		<pubDate>Mon, 13 May 2013 14:03:57 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Christian Drama]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10389</guid>
		<description><![CDATA[Yesterday was Mother&#8217;s Day, and we did a special drama at church to celebrate the occasion. I wrote the script many years ago, and the drama was well-received when we performed it. I generally don&#8217;t like to repeat dramas, but it had been so many years since we had performed this one, I assumed no [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10390" class="wp-caption alignleft" style="width: 273px"><a href="http://en.wikipedia.org/wiki/File:Mothers_Day_card.png"><img src="http://blog.drwile.com/wp-content/uploads/2013/05/momday.jpg" alt="" title="momday" width="263" height="328" class="size-full wp-image-10390" /></a><p class="wp-caption-text">Happy Mother&#039;s Day to all mothers out there!</p></div><span style="line-height: 140%;">Yesterday was Mother&#8217;s Day, and we did a special drama at church to celebrate the occasion.  I wrote the script many years ago, and the drama was well-received when we performed it.  I generally don&#8217;t like to repeat dramas, but it had been so many years since we had performed this one, I assumed no one would remember it.  I also think the drama is meaningful and touching, so it was worth doing again.  The mothers obviously agreed, as several sniffles were heard once the drama finished.</p>
<p>The idea for the script came from <a href="http://www.youtube.com/watch?v=TXvwgNVhz88">an old Jimmy Dean piece</a> I heard when I was young.  He talks about going through his wallet and finding a bunch of IOU&#8217;s to his mother.  I adapted that idea to a young lady packing up her dresser as she heads to college.  I hope you enjoy it.</p>
<p>As always, feel free to use this script in any way you think will be meaningful to the body of Christ, but I would appreciate a credit.</p>
<p><span id="more-10389"></span></p>
<p><center><strong>MOM &#8211; IOU Everything</strong></center></p>
<p>(The lights come up on a young lady, Stephanie, who is in her late teens.  She is sitting on a box and has some other boxes scattered around her.  If possible, there is a dresser with several drawers open, but that&#8217;s not necessary.  Stephanie is holding some scraps of paper, a large pad of paper, and a pen or pencil.  She is looking off into the distance.  Her mom enters.  Mom is rushed, distracted, and a bit annoyed at Stephanie.)</p>
<p><strong>Mom</strong>: Stephanie, what are you doing?  You haven&#8217;t even cleaned out your dresser yet!  We&#8217;re never going to get you off to college if you don&#8217;t get these things boxed up!</p>
<p><strong>Stephanie</strong>: (She looks at her mother with a sentimental smile.)  Sorry, mom.  I got&#8230;distracted.  (Hands her the small scraps of paper.)  Do you remember these?</p>
<p><strong>Mom</strong>: (Still rushed and a bit annoyed, but the scraps do bring back a fond memory.)  Wow.  These are from quite a while ago, aren&#8217;t they?  (She reads one.)  &#8220;I owe you 75 cents for a Coke.&#8221;  (She reads another.)  &#8220;I owe you one dollar for an ice cream cone.&#8221;  (She reads one more.)  &#8220;I owe you two dollars for a set of barretes.&#8221;  These are the IOUs you wrote me back when we gave you an allowance.</p>
<p><strong>Stephanie</strong>: Yes.  I would spend all my allowance money and then want something else.  You wouldn&#8217;t give me any more money until I wrote out an IOU.  I guess I didn&#8217;t pay many of them back, did I?</p>
<p><strong>Mom</strong>: Actually, you paid back more than I ever expected.</p>
<p><strong>Stephanie</strong>: I remember being so proud each time I paid one back.  I would hand you the IOU and the money, and you would then say, &#8220;This IOU is paid in full.&#8221;</p>
<p><strong>Mom</strong>: I was proud of you, too.  I was trying to teach you to be responsible with your money, and every time you paid me back, I thought the lesson had sunk in&#8230;at least a little.  (Pause)  So this is what has been distracting you?</p>
<p><strong>Stephanie</strong>:  Not really.  When I found all those IOUs at the bottom of my dresser drawer, I felt like I had to write one more.  (She hands her mom the large pad of paper.)  Here.  Read this.</p>
<p><strong>Mom</strong>: (She starts to read in a businesslike way.)  Dear Mom, I owe you for the following services:</p>
<p><em>Janitorial</em> &#8211; You washed all my clothes, picked up after me, and dealt with my messes for 18 years, without a single &#8220;Thank you&#8221; from me.</p>
<p>(She gives Stephanie a look that says, &#8220;It&#8217;s about time you admitted that.&#8221;)</p>
<p>Uh huh.</p>
<p>(As she reads the next line, she goes from being businesslike to being touched.  The more she reads, the more emotional she becomes.)</p>
<p><em>Recreational</em> &#8211; You made this house a fun, happy, and safe place for me and all my friends &#8211; even the ones you didn&#8217;t like very much.</p>
<p><em>Psychological</em> &#8211; You gave me great advice that I couldn&#8217;t get anywhere else.  Even though I didn&#8217;t always listen, I now know how valuable it was.</p>
<p><em>Medical</em> &#8211; You kissed away every &#8220;boo-boo&#8221; I had, held my hand through nights that I thought I was too sick to sleep, and made me feel better than the best doctor in the world.</p>
<p>(She moves over to Stephanie and puts her arm around Stephanie&#8217;s shoulder.  Stephanie holds the hand that is on her shoulder.)</p>
<p><em>Emotional</em> &#8211; You rejoiced with me in the happy times, cried with me in the sad times, and carried me through those times I couldn&#8217;t have made it on my own.</p>
<p><em>Spiritual</em> &#8211; You showed me the kind of unconditional love that Jesus has for me.  Without your example, I don&#8217;t think I would have ever come to realize how much He loves me.</p>
<p>In short, mom, I owe you everything.</p>
<p>(By this time, mom is about to lose it.  In order to get herself under control, she walks a few steps away and then turns around to face Stephanie again.  She gets herself under control and with a genuine smile she says:)</p>
<p>Well, I guess it&#8217;s time to collect on this one.</p>
<p><strong>Stephanie</strong>: (Stands up)  What?  I can&#8217;t possibly pay you back for all of that.</p>
<p><strong>Mom</strong>: Of course you can.  (She opens her arms.)</p>
<p><strong>Stephanie</strong>: (Gives mom a hug.  She says her line while the embrace is still going on.)  I love you mom.</p>
<p><strong>Mom</strong>: (She gives her line while the embrace is still going on.)  This IOU is paid in full.</p>
<p>(The lights fade out.)</p>
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		<title>Give Her What She Wants!</title>
		<link>http://blog.drwile.com/?p=10374</link>
		<comments>http://blog.drwile.com/?p=10374#comments</comments>
		<pubDate>Thu, 09 May 2013 13:40:52 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Creationism]]></category>
		<category><![CDATA[Evolution]]></category>
		<category><![CDATA[Intelligent Design]]></category>
		<category><![CDATA[Modern Science]]></category>
		<category><![CDATA[The Wonders of Creation]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10374</guid>
		<description><![CDATA[An old proverb says, &#8220;The way to a man&#8217;s heart is through his stomach.&#8221; Some birds, like Eurasian Jays (Garrulus glandarius), have their own take on that proverb. These birds are monogamous,1 and they have an elaborate courtship ritual. Part of that ritual involves the male offering food to the female. For these birds, then, [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10375" class="wp-caption alignleft" style="width: 307px"><a href="http://en.wikipedia.org/wiki/File:Garrulus_glandarius_1_Luc_Viatour.jpg"><img src="http://blog.drwile.com/wp-content/uploads/2013/05/Eurasian_jay.jpg" alt="" title="Eurasian_jay" width="297" height="258" class="size-full wp-image-10375" /></a><p class="wp-caption-text">Eurasian Jays like this one are monogamous, and the male gets his mate by offering her food (click for credit).</p></div><span style="line-height: 140%;">An old proverb says, &#8220;The way to a man&#8217;s heart is through his stomach.&#8221;  Some birds, like Eurasian Jays (<em>Garrulus glandarius</em>), have their own take on that proverb.  These birds are monogamous,<a name="f1"></a><a href="#r1"><sup>1</sup></a> and they have an elaborate courtship ritual.  Part of that ritual involves the male offering food to the female.  For these birds, then, the way to the <em>female&#8217;s</em> heart is through her stomach.  Obviously, the male wants to offer the female something appealing, but how does he know what she wants?</p>
<p>It has been generally assumed that the male simply offers the female food that he likes.  After all, the ability to consider another individual&#8217;s feelings is rather advanced.  There is some evidence that great apes are able to consider the feelings of human beings,<a name="f2"></a><a href="#r2"><sup>2</sup></a> but in general, it has been thought that most animals don&#8217;t have the intellectual ability to realize that a different individual might have different feelings or preferences.  A recent experiment involving Eurasian Jays indicates that might not be correct.</p>
<p>In the experiment, a male was separated from a female by a wire fence.  The male could watch the female as she ate large meals of either moth larvae or mealworm larvae.  The male was then given a single mealworm larva and a single moth larva.  Consistently, the male would pick up the food that <em>was not in the female&#8217;s meal</em> and offer it to her through the wire fence.  The researchers concluded that this was because the male realized the female would be tired of what she had eaten in her large meal, and therefore the other food would be more appealing to her.  This, of course, would mean that the male realized the female might have a different preference than he did, and he took that into account when deciding what to offer her.<a name="f3"></a><a href="#r3"><sup>3</sup></a></p>
<p><span id="more-10374"></span></p>
<p>If that had been the end of the experiment, it wouldn&#8217;t be nearly as impressive.  After all, animals are very perceptive.  It&#8217;s possible that the female was doing something the experimenters didn&#8217;t notice in order to communicate her preference to the male.  To rule out this possibility, they repeated the experiment, but this time, they hid the meals from the male.  In this version of the experiment, the male often gave the female the same food she had just eaten.  This means the female probably wasn&#8217;t giving the male any cues.  Instead, the male seemed to be thinking about the female&#8217;s needs.  When he saw that she had plenty of one food, he consistently offered her the other.  When he didn&#8217;t see what she was eating, he didn&#8217;t have any preference in terms of which food he offered her.  The authors write:</p>
<blockquote><p>
Consequently, the males’ sharing pattern was not simply a response to their mate’s behavior indicating her preference as to what he should share, nor was it a response to the males’ own desire-state. Our results raise the possibility that these birds may be capable of ascribing desire to their mates.
</p></blockquote>
<p>So it seems that at least when it comes to male Eurasian Jays, some animals are intellectually advanced enough to realize that another individual&#8217;s desires might be different from his own.  That doesn&#8217;t really surprise me.  Unfortunately, the hypothesis of evolution has conditioned us to think that some animals are &#8220;dumb,&#8221; because they aren&#8217;t as &#8220;highly evolved&#8221; as other animals.  However, that&#8217;s not how a creationist should think.  A creationist should realize that God created each kind of animal with all the physical and intellectual attributes it needs in order to thrive.  Since animals interact with all sorts of other animals (and people), it makes sense that they would have been designed with the ability to recognize the desires of others.  I suspect that as more research is done, scientists will find this ability in many other animals.</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1.  <em>National Geographic Complete Birds of the World</em>, Tim Harris (Ed.), National Geographic 2009, p. 270<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2.  Buttelmann D, Call J, and Tomasello M., &#8220;Do great apes use emotional expressions to infer desires?&#8221; <em>Developmental Science</em> <strong>12(5)</strong>:688-698, 2009<br />
<a href="#f2">Return to Text</a></p>
<p><a name="r3"></a>3.  Ljerka Ostojić, Rachael C. Shaw, Lucy G. Cheke, and Nicola S. Clayton, &#8220;Evidence suggesting that desire-state attribution may govern food sharing in Eurasian jays,&#8221;  <em>Proceedings of the National Academy of Sciences of the United States of America</em> <a href="http://www.pnas.org/content/early/2013/01/29/1209926110">doi:10.1073/pnas.1209926110</a>, 2013<br />
<a href="#f3">Return to Text</a></p>
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		<title>The Sioux Empire Christian Home Educators Convention</title>
		<link>http://blog.drwile.com/?p=10327</link>
		<comments>http://blog.drwile.com/?p=10327#comments</comments>
		<pubDate>Tue, 07 May 2013 13:46:54 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Answered Questions]]></category>
		<category><![CDATA[Home Education]]></category>
		<category><![CDATA[Notes From The Road]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10327</guid>
		<description><![CDATA[This past weekend, I spoke at the Sioux Empire Christian Home Educators (SECHE) convention. It was a small convention, but it was well-organized and full of enthusiasm. While I can understand the draw that large conventions have (lots of speakers, all manner of curriculum and resources in the vendor hall, etc.), there are a lot [...]]]></description>
			<content:encoded><![CDATA[<p>This past weekend, I spoke at the Sioux Empire Christian Home Educators (SECHE) convention.  It was a small convention, but it was well-organized and full of enthusiasm.  While I can understand the draw that large conventions have (lots of speakers, all manner of curriculum and resources in the vendor hall, etc.), there are a lot of advantages to small conventions as well.  I got to spend a lot of time with each individual who wanted to speak with me personally, and there was plenty of time in each session for everyone to have their questions answered.  The &#8220;personal touch&#8221; that is available at smaller conventions simply can&#8217;t be experienced at the larger ones.</p>
<p>I gave a total of five talks at the convention, including <a href="http://www.drwile.com/hs_how_why.pdf">Homeschooling: Discovering How and Why It Works</a>.  In that talk, I give lots of statistics regarding students who are educated at home.  For example, I discuss the <a href="http://www.google.com/url?sa=t&#038;rct=j&#038;q=&#038;esrc=s&#038;source=web&#038;cd=3&#038;ved=0CGQQFjAC&#038;url=http%3A%2F%2Fepaa.asu.edu%2Fojs%2Farticle%2Fdownload%2F543%2F666&#038;ei=8fuIUeMYxP3KAaWJgcgB&#038;usg=AFQjCNFhczoryYQ51m79F5QApY1nS6qmWw&#038;sig2=VMQgvIbxlQK0sBFUTOujZQ&#038;bvm=bv.45960087,d.aWc&#038;cad=rja">Rudner study</a>, which found that at every grade level, the average homeschooled student scored better on standardized tests than the average privately-schooled student, who in turn scored better than the average publicly-schooled student.  It also shows that the average publicly-schooled student lags farther and farther behind the the older he or she gets.  From an academic standpoint, then, it is more important to avoid public school in the junior high and high school years than it is in the elementary years.</p>
<p>In addition, I show Rudner&#8217;s comparison between students who are homeschooled every year of their K-12 education and those who are homeschooled for only some of those years.  While there is no difference (on average) between the two groups in the elementary years, by the time the students are in junior high and high school, those who did not stay in homeschool lag behind those who are homeschooled every year.  To me, this indicates that homeschoolers make the most academic gains in the junior high and high school years.  I like the Rudner study, because <a href="http://www.city-journal.org/html/10_3_an_a_for_home.html">the author was initially a skeptic of home education</a>, thinking that home educators were a bunch of &#8220;conservative nuts.&#8221;</p>
<p>After I discuss the data related to homeschooled students, I switch to the data related to homeschool graduates.  I show several studies that clearly demonstrate that homeschool graduates excel at the university level compared to their publicly- and privately-schooled peers (see <a href="http://blog.drwile.com/?p=2870">here</a>, <a href="http://blog.drwile.com/?p=9303">here</a>, and <a href="http://blog.drwile.com/?p=10014">here</a>, for example).  This led to a very interesting question from an audience member.</p>
<p><span id="more-10327"></span></p>
<p>A homeschooling father asked (I am paraphrasing here): &#8220;How do you account for the fact that homeschoolers who leave homeschool in junior high and high school experience educational losses, but when they leave homeschool for college they experience educational gains?&#8221;  I thought that was a good question, but I have to point out that the comparison is not really valid.  After all, the Rudner study showed that when compared to <em>homeschooled students</em>, the students who go junior high or high school have educational losses.  The studies about homeschool graduates simply compared homeschool graduates at university to their <em>non-homeschooled peers</em>.  They didn&#8217;t compare homeschool graduates at university to homeschool graduates who were continuing their education at home.  That would be a hard study to do for a variety of reasons.</p>
<p>However, I do think the question is still a good one, because I think it is (in general) not a good idea for a student to leave homeschool to go to a high school, but I think it is an excellent idea for a homeschool graduate to leave home to go to a college or university.  Why?  I think maturity is the key.  When a student is starting high school, he or she is not very mature.  As a result, the student is <em>very easily</em> distracted in a school setting.  The opposite gender, peer pressure, sports, and all manner of other nonacademic pursuits make it very hard for the student to concentrate on what he or she is learning.  </p>
<p>Now don&#8217;t get me wrong.  I don&#8217;t think that the opposite gender, peer group, sports, and all those other things should be <em>avoided</em> in high school.  I just think that in schools, they are <em>overemphasized</em>.  The students spend far too much time dealing with such distractions, to the detriment of their studies.  In a homeschool environment, such distractions should be available to the student, but they should be heavily supervised by the parents and should not become a big part of the &#8220;academic day.&#8221;  That way, the student can mature <em>both</em> academically <em>and</em> socially in a balanced way.</p>
<p>Once students get through those high school years, they have matured a bit.  They have a better idea of what they want to do for the rest of their lives, and more importantly, they have a better idea of what&#8217;s important in life.  As a result, when they go on to college, they are <em>less likely</em> to be distracted by all the other aspects of school life.  In addition, the peer group to which they are exposed is (on average) a bit more mature than the one in high school.  Obviously, there will still be the partiers and the boozers on almost any campus, but in general, they aren&#8217;t as popular or as common as they are in high school, so they are more easily avoided.</p>
<p>Now, of course, if maturity is the key, that should tell homeschooling parents something.  Whether or not your child attends university, and <em>when</em> your child attends university, should not be decided based on your child&#8217;s age or educational status.  Just because your child is 18 or has finished high school, that&#8217;s no reason to automatically send him or her to university.  Instead, your child&#8217;s <em>maturity and goals</em> should determine that.  Your child will be more easily distracted at university if he or she is immature and/or has no serious reason for being there.</p>
<p>Please realize that maturity and a reason to be there still won&#8217;t <em>guarantee</em> your student will avoid distractions at university!  They will just <em>make it easier</em> for the student to avoid such things.  Of course, the way to make them even more likely to avoid distraction is to make sure they have a peer group that is focused on important things.  I strongly encourage <em>everyone</em> who sends their children to university (public or private) to make sure they are plugged into an on-campus Christian fellowship group like <a href="http://www.intervarsity.org/">Intervarsity Christian Fellowship</a>, <a href="http://www.campusnavs.org/">Navigators</a>, <a href="http://www.cru.org/">Campus Crusade for Christ</a>, etc.  I know that I would not have grown nearly as much (spiritually or academically) had it not been for my Intervarsity group at the University of Rochester!</p>
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		<title>Another Amazing Homeschool Graduate</title>
		<link>http://blog.drwile.com/?p=10304</link>
		<comments>http://blog.drwile.com/?p=10304#comments</comments>
		<pubDate>Wed, 01 May 2013 12:56:44 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Home Education]]></category>
		<category><![CDATA[Modern Science]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10304</guid>
		<description><![CDATA[I became interested in home education because while I was on the faculty at Ball State University, my best chemistry and physics students were homeschool graduates. The more I studied home education, the more clear it became to me that for most students, it produces a superior education. As a result, I started working with [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10311" class="wp-caption alignleft" style="width: 276px"><img src="http://blog.drwile.com/wp-content/uploads/2013/05/younes1.jpg" alt="" title="younes" width="266" height="326" class="size-full wp-image-10311" /><p class="wp-caption-text">Talal Younes (left) with Dr. Tyler Hodges of William Carey University (right), who presented Talal with the Senior Biology Award.</p></div><span style="line-height: 140%;">I became interested in home education because while I was on the faculty at Ball State University, my best chemistry and physics students were homeschool graduates.  The more I studied home education, the more clear it became to me that for most students, it produces a superior education.  As a result, I started working with home educators, and eventually, I started writing curriculum for them.  Over the years, I have been truly blessed to hear from homeschool graduates who have gone on to do great things in their chosen fields of study.  For example, not all that long ago, I met up with <a href="http://blog.drwile.com/?p=8729">Joshua Russell</a>, an amazing homeschool graduate from Alaska.  His performance in a summer college program was so impressive that he was awarded a full-ride scholarship to any school in the University of Alaska system!</p>
<p>Well, I recently heard from a justifiably proud parent regarding her homeschool graduate&#8217;s success.  His name is Talal Younes, and the picture above shows him with one of his professors at <a href="https://www.wmcarey.edu/">William Carey University</a>.  The picture was taken at the Honors Day Convocation held by the university, and it shows him with the Senior Biology Award he received.  This means that he was the outstanding senior biology student over the entire year.  Of course, one award wasn&#8217;t enough for Talal, so he also received the Senior Chemistry Award at the same event!</p>
<p>As if that&#8217;s not enough, Talal&#8217;s mother was kind enough to share with me the title of his Senior Honors Thesis: &#8220;Proposal of a Novel Mechanism for Alpha-synuclein Induced Neurodegeneration in Parkinson&#8217;s Disease.&#8221;  In order to receive graduation honors at William Carey University, a student must complete an honors thesis in his or her area of study.  However, a student can&#8217;t just decide to do an honors thesis on his or her own.  The student must be <em>invited</em> to do so by a faculty member who wishes to supervise the thesis.  Thus, the very fact that Talal can do a Senior Honors Thesis tells you he was so impressive that a professor wanted to spend extra time and energy working with him!</p>
<p><span id="more-10304"></span></p>
<p>If you want to have some idea of what his Senior Honors Thesis is all about, alpha-synuclein is a small protein that is produced mainly in the brain.<a name="f1"></a><a href="#r1"><sup>1</sup></a>  Neurologists are not quite sure what its function is, but some evidence suggests it might stabilize the outside layer (called the membrane) of certain nervous system cells.<a name="f2"></a><a href="#r2"><sup>2</sup></a>  Other evidence suggests that it helps the cells of the nervous system change the patterns with which they connect to other cells of the nervous system.<a name="f3"></a><a href="#r3"><sup>3</sup></a>  Mutations in the gene that produces this protein have been linked to Parkinson’s Disease,<a name="f4"></a><a href="#r4"><sup>4</sup></a>, but how the protein contributes to the disease is still unknown.  Based on the title of his thesis, it seems that Talal and his thesis advisor are suggesting a specific mechanism by which the protein contributes to Parkinson’s Disease.</p>
<p>Even though I don&#8217;t know Talal personally, I do have some experience with him.  Back when I owned a publishing company, I used to have a contest called the &#8220;Science Question of the Week.&#8221;  Each week, students would be challenged to answer a science question, and after 12 weeks, the student with the most correct answers would receive a prize.  Talal was a regular participant in the contest, and he was <em>tenacious</em>!  The competition was fierce, because there were many brilliant homeschooled students answering the questions, and usually, the winner had to have a perfect score.  Time and time again, Talal was one or two questions away from winning, but he persevered until he did, indeed, win the contest.  With his obvious talent and his tenacious attitude, I wouldn&#8217;t be surprised if one day he does figure out how alpha-synuclein contributes to Parkinson’s Disease!</p>
<p>Before I end this post, I do want to add one thing.  In her message to me, Talal&#8217;s mother said this:</p>
<blockquote><p>
&#8230;he is still loving science. He credits you with helping create this passion.
</p></blockquote>
<p>Obviously, Talal and his parents deserve most of the credit for developing his God-given talents so thoroughly.  However, I can&#8217;t tell you how much it means to know that I had a tiny part to play in the production of such a talented scientist!  Thank you Talal.  You have encouraged me greatly!</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1.  Iwai, A., Yoshimoto, M., Masliah, E., Saitoh, T., &#8220;The precursor protein of non-A beta component of Alzheimer’s disease amyloid is a presynaptic protein of the central nervous system,&#8221; <em>Neuron</em> <strong>14</strong>:467-475, 1995<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2.  Davidson, W. S., Jonas, A., Clayton, D. F., George, J. M., &#8220;Stabilization of alpha-synuclein secondary structure upon binding to synthetic membranes,&#8221; <em>Journal of Biological Chemistry</em> <strong>273</strong>:9443-9449, 1998<br />
<a href="#f2">Return to Text</a></p>
<p><a name="r3"></a>3.  Clayton, D. F., George, J. M., &#8220;Synucleins in synaptic plasticity and neurodegenerative disorders,&#8221; <em>Journal of Neuroscience Research</em> <strong>58</strong>:120-129, 1999<br />
<a href="#f3">Return to Text</a></p>
<p><a name="r4"></a>4.  Polymeropoulos, M. H., <em>et al</em>, &#8220;Mutation in the alpha-synuclein gene identified in families with Parkinson’s disease,&#8221; <em>Science</em> <strong>276</strong>:2045-2047, 1997<br />
<a href="#f4">Return to Text</a></p>
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		<title>The SHEM Homeschool Convention (and some awesome questions)</title>
		<link>http://blog.drwile.com/?p=10275</link>
		<comments>http://blog.drwile.com/?p=10275#comments</comments>
		<pubDate>Mon, 29 Apr 2013 13:50:41 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Answered Questions]]></category>
		<category><![CDATA[Notes From The Road]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10275</guid>
		<description><![CDATA[This past weekend, I spoke at the Southwest Home Education Ministry Convention in Springfield, Missouri. It was a well-organized, well-attended convention with many excellent speakers. I had a total of seven sessions, including two with Diana Waring. One of the things that I love about doing conventions is that I get a chance to speak [...]]]></description>
			<content:encoded><![CDATA[<p>This past weekend, I spoke at the <a href="http://shemonline.org/Convention.aspx">Southwest Home Education Ministry Convention</a> in Springfield, Missouri.  It was a well-organized, well-attended convention with many excellent speakers.  I had a total of seven sessions, including two with <a href="http://www.dianawaring.com/">Diana Waring</a>.  One of the things that I love about doing conventions is that I get a chance to speak with a lot of people one-on-one.  I personally think that&#8217;s where I can help people the most.  It&#8217;s also a chance for me to be incredibly blessed.  </p>
<p>After my very first talk at this convention, for example, a young lady came up to me to tell me that she is a nurse today because of my courses.  I thanked her and told her that I was very happy my courses prepared her for college so that she could become a nurse.  She immediately stopped me and emphatically told me it was <em>much more</em> than that.  She said that before she started using my courses, she hated science.  After using my courses, she not only loved science, but she realized that God wanted her to use science to help others.  She said she would never have even considered becoming a nurse had it not been for learning science from my courses.  I kind of teared up right there and told her I had no idea how I could thank her for telling me that.</p>
<p>Usually, it&#8217;s conversations like that one which I enjoy most at these conventions.  However, as much as my conversation with this young lady (and many other such conversations throughout the weekend) were a blessing to me, I have to say that the most enjoyable part of the convention was a session I did with the teens.  The organizers of the convention wanted me to do something different from a normal presentation, and they actually suggested that I do something related to acting, since they knew I <a href="http://blog.drwile.com/?cat=20">write and perform dramas for my church</a>.  However, I told them I had no idea what I would do for a drama workshop, so I suggested a question/answer session.</p>
<p>The organizers decided it was a good idea, so they put it on the schedule and then put out notices telling teens that they would have a chance to ask me any questions they wanted to ask.  I had a &#8220;backup plan&#8221; in place in case there were few (or no) questions, but from the moment the session started, I knew there was no need for it.  Not only were there an enormous number of questions (so many that I had to cut them off after an hour and 15 minutes so the next session could start), but the teens were <em>incredibly</em> enthusiastic!  Below the fold, you will find three of the excellent questions they asked me, along with a rough approximation of my answers.</p>
<p><span id="more-10275"></span></p>
<p><strong>What&#8217;s the most important reason you believe in creation?</strong></p>
<p>I can&#8217;t list just one reason.  I believe in creation because of the <em>preponderance</em> of the evidence.  There is some evidence for evolution (in the the flagellate-to-philosopher sense).  After all, the geological column as presented in textbooks is exactly what one would predict from an evolutionary perspective.  Of course, there are many problems with the geological column (see <a href="http://blog.drwile.com/?p=6459">here</a>, <a href="http://blog.drwile.com/?p=7431">here</a>, and <a href="http://creation.com/does-geologic-column-exist">here</a>, for example), but nevertheless, it has to be counted as a mark in favor of evolution.  In addition, the existence of &#8220;shared mistakes&#8221; in pseudogenes is evidence of common ancestry, but <a href="http://blog.drwile.com/?p=7375">I find that evidence very weak</a>.  Thus, the idea of &#8220;simple&#8221; life forms becoming more complex over time has some evidence for it, but the evidence is rare and usually rather weak.  In addition, there has been a long string of failed predictions coming from the evolutionary hypothesis (see <a href="http://blog.drwile.com/?p=2900">here</a>, <a href="http://blog.drwile.com/?p=6828">here</a>, and <a href="http://www.darwinspredictions.com/">here</a>, for example).</p>
<p>When I look at the evidence for creation, however, I find it to be plentiful and strong.  The myriad of exquisitely-designed organisms we study in nature provides strong evidence for a Creator (see <a href="http://blog.drwile.com/?p=8161">here</a>, <a href="http://blog.drwile.com/?p=9810">here</a>, and <a href="http://blog.drwile.com/?p=10211">here</a>, for example).  The incredible examples of mutualism that we see throughout creation provide strong evidence that nature works according to a pre-planned strategy (see <a href="http://blog.drwile.com/?p=408">here</a>, <a href="http://blog.drwile.com/?p=4092">here</a>, and <a href="http://blog.drwile.com/?p=2014">here</a>, for example).  The many negative feedback mechanisms we see operating on earth indicate that it has been carefully designed (see <a href="http://blog.drwile.com/?p=6624">here</a>, <a href="http://blog.drwile.com/?p=4297">here</a>, and <a href="http://blog.drwile.com/?p=10164">here</a>, for example).  In addition, the predictions that creationists have made over the years which have later been confirmed by the data provide strong evidence for creation (see <a href="http://blog.drwile.com/?p=6790">here</a>, <a href="http://blog.drwile.com/?p=2670">here</a>, and <a href="http://blog.drwile.com/?p=8594">here</a>, for example).  </p>
<p>So in the end, there isn&#8217;t just one thing that makes me believe in creation.  I believe in creation because the <em>preponderance</em> of the evidence points strongly towards it.</p>
<p><strong>What&#8217;s your favorite thing about being a scientist?</strong></p>
<p>Believe it or not, my favorite thing about being a scientist is learning when I am wrong.  I remember the first time this happened to me.  I was a graduate student and had produced some data that I thought said something quite remarkable.  I presented the data at a nuclear chemistry conference, and at dinner that night, several groups started talking about my presentation.  Pretty quickly, four distinct interpretations of the data emerged, and mine was only one of those interpretations.  I was first shocked that anyone would come up with an alternate interpretation of <em>my data</em>, but as I thought about it, I realized how cool it was.  We decided to collect more data to try to judge which was the better interpretation, and it turned out that mine was wrong!  However, the new data allowed me to discover <a href="http://prl.aps.org/abstract/PRL/v63/i23/p2551_1">something even more interesting</a>!  At least, it&#8217;s interesting to a nerd like me. </p>
<p>Since then, I have been shown to be incorrect time and time again, and in each case, I have learned something interesting as a result.  <a href="http://blog.drwile.com/?p=6944">A while back, I wrote about another example</a>.  Science is about hypothesizing and testing your hypothesis.  A scientist will often find his or her hypotheses to be wrong, and a <em>good</em> scientist will be excited to learn that nature isn&#8217;t behaving the way he or she thinks it is!</p>
<p><strong>Do you ever regret becoming a scientist?</strong></p>
<p>To me, this was the best question of the session.  The answer is, &#8220;Yes, from time to time.&#8221;  When I first seriously thought about what I wanted to do for the rest of my life, I decided to be a concert pianist.  However, over time I learned that my fingers are just too short to accommodate the repertoire expected for any serious pianist.  Of course, I still play the piano as a hobby.  For example, I play for my church when the good pianists aren&#8217;t available.  People say it&#8217;s fun to watch me play, because I get lost in my music, swaying, bobbing my head, and sometimes even singing.  At times like that, I do regret the fact that being a scientist has caused me to reduce my time at the keys. </p>
<p>When I learned that I couldn&#8217;t seriously pursue piano as a profession, I decided to become a professional actor.  However, I quickly decided the lifestyle wasn&#8217;t for me.  As I mentioned above, I am still involved in the theater.  In addition to what I do at my church, I also act in a local community group.  Just recently, I played the leading man in an old musical called <em>Sweet Charity</em>.  I don&#8217;t particularly like the script of the show, but my leading lady (whose first name is Tiffany) was <em>utterly brilliant</em>.  There is a scene that happens in a stuck elevator, and it can be one of the funniest scenes you will ever see on stage, as long as it is played correctly.  Tiffany was so spot-on that the scene was nearly magical.  I do remember once in the middle of that scene thinking that had I not become a scientist, I could have been doing a <em>lot</em> more scenes with <em>incredibly talented</em> actors and actresses like Tiffany.  </p>
<p>On balance, however, I can&#8217;t think of anything else I would rather do for a living.  Not only do I get to learn new things all the time, I also get to learn more about God by studying His handiwork.  While I honestly do regret it from time to time, I can&#8217;t really imagine enjoying any other career for as long as I have enjoyed being a scientist!</p>
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		<title>Another Fossil Surprise</title>
		<link>http://blog.drwile.com/?p=10235</link>
		<comments>http://blog.drwile.com/?p=10235#comments</comments>
		<pubDate>Wed, 24 Apr 2013 15:01:43 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Age of the Earth]]></category>
		<category><![CDATA[Modern Science]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10235</guid>
		<description><![CDATA[Archaeopteryx is an extinct bird that we know only from the fossils it left behind. There are eleven discovered fossils in existence, and the one that is generally considered the most well-preserved is called the &#8220;Thermopolis specimen.&#8221; It was found somewhere in the Solnhofen region of Germany and was part of a private collection until [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10236" class="wp-caption aligncenter" style="width: 490px"><a href="https://en.wikipedia.org/wiki/File:Archaeopteryx_ka03.jpg"><img src="http://blog.drwile.com/wp-content/uploads/2013/04/archie.jpg" alt="" title="archie" width="480" height="360" class="size-full wp-image-10236" /></a><p class="wp-caption-text">This Archaeopteryx fossil, known as the &quot;Thermopolis specimen,&quot; was analyzed chemically.  The results were surprising to those who think it is millions of years old (click for credit)</p></div><br />
<em>Archaeopteryx</em> is an extinct bird that we know only from the fossils it left behind. There are eleven discovered fossils in existence, and the one that is generally considered the most well-preserved is called the &#8220;Thermopolis specimen.&#8221; It was found somewhere in the Solnhofen region of Germany and was part of a private collection until it was acquired by the Wyoming Dinosaur Center in Thermopolis, Wyoming.<a name="f1"></a><a href="#r1"><sup>1</sup></a> The Solnhofen Limestone formation, where it was probably preserved, is thought to be 150 million years old.<a name="f2"></a><a href="#r2"><sup>2</sup></a> Because the specimen is so well-preserved, geochemist Roy Wogelius and his colleagues wanted to analyze the specimen chemically, to see if there were any chemical remnants of the actual bird still in the fossil.</p>
<p>How do you chemically analyze a fossil without destroying it? One way is to use the Stanford Synchrotron Radiation Lightsource (SSRL). This instrument produces high-intensity X-rays which are used to illuminate the material being studied. The elements in the material absorb these X-rays, becoming &#8220;excited&#8221; with the extra energy. In order to &#8220;de-excite,&#8221; they release that energy with X-rays of their own. The released X-rays are different for each element, so when you analyze the X-rays being emitted by the illuminated fossil, you can determine what elements exist in the fossil, along with their concentrations.</p>
<p>So Roy Wogelius and his colleagues teamed up with some physicists at Stanford University to analyze this incredibly well-preserved <em>Archaeopteryx</em> fossil. The results were surprising, at least to those who think the fossil is 150 million years old.</p>
<p><span id="more-10235"></span></p>
<p>The researchers first scanned the limestone slab in which the fossil was preserved so as to get an idea of what elements are in the limestone and how they are distributed. They then started scanning the fossil itself, and they found significant differences between the elements found in the fossil and the elements found in the surrounding limestone. For example, the fossilized bones, claws, skull, and teeth had similar concentrations of calcium, which were all much lower than the concentration of calcium found in the limestone itself. Conversely, the concentrations of zinc, phosphorus, and sulfur were all greater in the fossil than in the surrounding limestone.<a name="f3"></a><a href="#r3"><sup>3</sup></a></p>
<p>What does this tell us? Well, here&#8217;s what the authors say is their most striking result:</p>
<blockquote><p>&#8230;elevated Zn levels associated with the skull and other bones have persisted over geological time and most likely, along with phosphorous and sulfur, are remnants of the original bone chemistry.</p></blockquote>
<p>So even after a supposed 150 million years, there is still a lot of the original chemistry from the bird itself. While this is amazing, I thought the other thing they discovered was even more incredible. When they looked at the levels of phosphorus in the rachises (feather shafts) that are preserved in the limestone, they found that the levels were once again quite different from the surrounding limestone. Instead, they were very similar to the levels found in the rachises of birds that are currently alive!</p>
<p>This is really surprising, because it has always been thought that the feathers we see in these <em>Archaeopteryx</em> fossils are just impressions left behind in the surrounding limestone. However, that&#8217;s not what these results indicate. As the authors state:</p>
<blockquote><p>Here we present chemical imaging via synchrotron rapid scanning X-ray fluorescence (SRS-XRF) of the Thermopolis Archaeopteryx, which shows that portions of the feathers are not impressions but are in fact remnant body fossil structures, maintaining elemental compositions that are completely different from the embedding geological matrix.</p></blockquote>
<p>So in the end, the fossil seems to have remnants of the original chemistry of the bones, claws, skull, and teeth. More surprisingly, <em>it even has remnants of the original feather shafts</em>!</p>
<p>This kind of analysis, <a href="http://blog.drwile.com/?p=10065">combined with the results of several other fossil analyses</a>, provide strong evidence that such fossils are not millions of years old.</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1. Gerald Mayr, Burkhard Pohl, and D. Stefan Peters, &#8220;A Well-Preserved <em>Archaeopteryx</em> Specimen with Theropod Features,&#8221; <em>Science</em> <strong>310</strong>:1483-1486, 2005.<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2. Paul Selden and John Nudds, <em>Evolution of Fossil Ecosystems</em>, Manson Publishing 2012, p. 159.<br />
<a href="#f2">Return to Text</a></p>
<p><a name="r3"></a>3. U. Bergmann, R. W. Morton, P. L. Manning, W. I. Sellers, S. Farrar, K. G. Huntley, R. A. Wogelius, and P. Larson, &#8220;Archaeopteryx feathers and bone chemistry fully revealed via synchrotron imaging,&#8221; <em>Proceedings of the National Academy of Sciences of the United States of America</em> <strong>107(20)</strong>:9060–9065 2010. (<a href="http://www.pnas.org/content/107/20/9060.full">available online</a>)<br />
<a href="#f3">Return to Text</a></p>
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		<title>Nematode Nervous System: A 1-in-40-Million Design</title>
		<link>http://blog.drwile.com/?p=10211</link>
		<comments>http://blog.drwile.com/?p=10211#comments</comments>
		<pubDate>Mon, 22 Apr 2013 17:14:38 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Creationism]]></category>
		<category><![CDATA[Evolution]]></category>
		<category><![CDATA[Intelligent Design]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10211</guid>
		<description><![CDATA[I have been doing an &#8220;interstate book club&#8221; with one of the most brilliant people I know. She and I read the same book and call each other on a regular basis to discuss it. We are currently covering Jerry Fodor and Massimo Piatelli-Palmarini&#8217;s book, What Darwin Got Wrong. I suspect that I will do [...]]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_10216" class="wp-caption alignleft" style="width: 290px"><a href="http://en.wikipedia.org/wiki/File:CelegansGoldsteinLabUNC.jpg"><img src="http://blog.drwile.com/wp-content/uploads/2013/04/nematode1.jpg" alt="" title="nematode" width="280" height="238" class="size-full wp-image-10216" /></a><p class="wp-caption-text">This nematode&#039;s nervous system is perfectly wired for minimum use of materials. (click for credit)</p></div><span style="line-height: 140%;">I have been doing an &#8220;interstate book club&#8221; with one of the most brilliant people I know.  She and I read the same book and call each other on a regular basis to discuss it.  We are currently covering Jerry Fodor and Massimo Piatelli-Palmarini&#8217;s book, <em>What Darwin Got Wrong</em>.  I suspect that I will do a complete review of the book at some point, but I ran across something that I found so amazing, I had to write about it today.  It has to do with the roundworm known as <em>Caenorhabditis elegans</em>, which is pictured above.  This tiny (about 1 millimeter long), transparent worm has been studied extensively.  In fact, it was the first multicellular organism to have its genome fully sequenced.<a name="f1"></a><a href="#r1"><sup>1</sup></a></p>
<p>Before that happened, however, Christopher Cherniak did a detailed analysis of the creature&#8217;s nervous system.  Approximately one-third of the cells in the roundworm&#8217;s body are nerve cells, so the nervous system is obviously important to this tiny animal.  The system is made of clumps of nerve cells (called <strong>ganglia</strong>) in the head, tail, and scattered throughout the main nerve cord, which runs along the bottom of the worm&#8217;s body.  While this system is &#8220;simple&#8221; compared to the kind of nervous systems you find in many other animals, it has served as a model for helping scientists understand how nervous systems develop and function in general.</p>
<p>Of course, since the nervous system has to process sensory information and control various muscle movements, the ganglia must be connected to one another, to the receptors that sense the outside world, and to the muscles that the nervous system controls.  Obviously, then, there is a lot of &#8220;wiring&#8221; involved.  Cherniak wanted to know what determined how this wiring was done in the animal, so he computed all the possible ways that the worm&#8217;s nervous system could be wired, given its structure and the number of components it had.  His computation indicated that there were 39,916,800 ways the wiring could have been done.  </p>
<p>Now that&#8217;s a lot of possibilities, but even back in 1994, computers could easily analyze all of them, so he used 11 microcomputers to analyze all 39,916,800 ways the nervous system could be wired.  It took them a total of 50 hours to churn through the analysis, but what they found was incredible!</p>
<p><span id="more-10211"></span></p>
<p>In comparing the different means by which the nervous system could be wired, they found that there was a big difference in the amount of wiring used.  Some layouts were very efficient in how they used the wiring, and others were very inefficient.  How did the real nervous system layout compare?  Here is what Cherniak wrote:<a name="f2"></a><a href="#r2"><sup>2</sup></a></p>
<blockquote><p>
The actual ganglion order in fact appears to be the unique optimal one out of these millions for minimizing total interconnecting fiber length.
</p></blockquote>
<p>In other words, out of the nearly 40 million possibilities, the roundworm just happens to have the layout that requires the least amount of material!</p>
<p>Why is this important?  Because it argues strongly against the neo-Darwinian view that random mutation acted on by natural selection is what determines such things.  What&#8217;s the chance that random mutation would produce the <em>most optimum</em> design out of a possible 40 million?  After all, it took 11 microcomputers (using 1994 technology) a total of 50 hours to analyze the layouts and determine the most optimum design, and they were programmed specifically for that purpose.  Is it really possible that through the history of roundworm evolution, random mutation could &#8220;offer up&#8221; to natural selection the unique, best solution?</p>
<p>Of course, if this were the only example of such optimization, perhaps you could believe that the roundworm just got lucky.  Random mutation did just happen on the most optimum layout for its nervous system.  However, Fodor and Piatelli-Palmarini spend 12 pages cataloging many more examples of optimum design in living organisms.  Now, of course, they don&#8217;t like to use the term &#8220;design,&#8221; because they are both atheists and don&#8217;t want to refer to any kind of Designer in their analysis.  Instead, they want to believe that there are nonrandom forces at work that limit the ways in which organisms can evolve.  </p>
<p>To me, however, the reason for the nematode&#8217;s optimal nervous system is clear: it was designed by God.  As a result, you would expect the design to be elegant and efficient.  Thus, the fact that it is optimized to use the least amount of material is not surprising.  The same could be said of the other examples covered in the 12 pages I mentioned above.  In the end, the creationist view expects a myriad of optimal designs in nature, and that&#8217;s precisely what you find.  Now, of course, there are some designs that don&#8217;t appear to be optimal, but they are few and far between.  In addition, <a href="http://blog.drwile.com/?p=1060">some designs that initially appear suboptimal end up being pronounced optimal based on additional research</a>.  The over-arching principle in nature seems to be that of optimal design.  While evolutionists might be able to eventually find some explanation around this fact, Fodor and Massimo Piatelli-Palmarini clearly show that they haven&#8217;t been able to do so yet.  </p>
<p>In the creationist view, there is no need to explain around things like the layout of the nematode&#8217;s nervous system.  It is exactly what you would expect from a creation made by the Almighty.</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1.  The C. elegans Sequencing Consortium, Consortium, &#8220;Genome sequence of the nematode C. elegans: a platform for investigating biology,&#8221; <em>Science</em> <strong>282</strong>: 2012–2018, 1998.<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2.  Christopher Cherniak, &#8220;Component Placement Optimization in the Brain,&#8221; <em>The Journal of Neuroscience</em> <strong>14(4)</strong>:2418-2427, 1994.<br />
<a href="#f2">Return to Text</a></p>
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		<title>Are We Becoming Less Intelligent?</title>
		<link>http://blog.drwile.com/?p=10199</link>
		<comments>http://blog.drwile.com/?p=10199#comments</comments>
		<pubDate>Wed, 17 Apr 2013 14:41:52 +0000</pubDate>
		<dc:creator>jlwile</dc:creator>
				<category><![CDATA[Creationism]]></category>
		<category><![CDATA[Modern Science]]></category>

		<guid isPermaLink="false">http://blog.drwile.com/?p=10199</guid>
		<description><![CDATA[Somewhere around 200 BC, a man named Eratosthenes learned that at noon on the Summer Solstice in Syene, a man looking down a deep well would see no light in the well, because his shadow would block all the sunlight. He reasoned that this meant the sun was directly overhead in the city of Syene [...]]]></description>
			<content:encoded><![CDATA[<div id="attachment_10200" class="wp-caption alignleft" style="width: 288px"><img class="size-full wp-image-10200" title="erat" src="http://blog.drwile.com/wp-content/uploads/2013/04/erat.jpg" alt="" width="278" height="275" /><p class="wp-caption-text">A portrait of Eratosthenes, who lived from 276 BC to 194 BC (public domain image)</p></div>
<p><span style="line-height: 140%;"><span style="line-height: 140%;">Somewhere around 200 BC, a man named Eratosthenes learned that at noon on the Summer Solstice in Syene, a man looking down a deep well would see no light in the well, because his shadow would block all the sunlight. He reasoned that this meant the sun was directly overhead in the city of Syene at that moment. Well, he lived in Alexandria, which was about 500 miles south of Syene. He measured the length of a pole&#8217;s shadow in Alexandria at noon on the Summer Solstice and from that determined the angle at which the sun shined on Alexandria when the sun was directly overhead in the city of Syene.</span></span></p>
<p>Why would Eratosthenes do this? Well, like all ancient natural philosophers (including the Christian ones who would come a few hundred years later), he understood that the earth is a sphere. If you are under the mistaken impression that most ancient people thought the earth was flat, you need to realize that this is a <a href="http://blog.drwile.com/?p=10014">textbook myth</a> that is repeated over and over again but is nevertheless quite false. Since he knew that the earth is a sphere, he used his measurement to reason that the distance between Syene and Alexandria is about one-fiftieth of the distance around that sphere. He then took the known distance between Syene and Alexandria and multiplied by 50 to get the total distance around the earth. The unit he used to measure distance (the stadium) had different definitions at the time, but assuming he used the one that was typically used for long journeys, his measurement was correct to within 2% of today&#8217;s accepted value.<a name="f1"></a><a href="#r1"><sup>1</sup></a></p>
<p>Does that surprise you? It shouldn&#8217;t. In today&#8217;s culture, we think of ancient people as ignorant savages, but in fact, many of them were incredibly intelligent. According to at least one geneticist, <em>they were probably more intelligent than we are</em>! In a two-part series published in the journal <em>Trends in Genetics</em>, Dr. Gerald R. Crabtree states:<a name="f2"></a><a href="#r2"><sup>2</sup></a></p>
<blockquote><p>I would wager that if an average citizen from Athens of 1000 BC were to appear suddenly among us, he or she would be among the brightest and most intellectually alive of our colleagues and companions, with a good memory, a broad range of ideas, and a clear-sighted view of important issues.</p></blockquote>
<p><span id="more-10199"></span></p>
<p>How can Dr. Crabtree make such a seemingly absurd statement? He argues that our intellectual abilities are governed by all sorts of genes. In fact, based on some studies that have been done on X chromosome mutations that lead to intellectual deficiencies, he produces a conservative estimate that human intelligence is influenced by 2,000-5,000 genes. Based on estimates of mutation rates in the human population, he suggests that this collection of genes must have been affected by many mutations over the past three thousand years. Indeed, he suggests:</p>
<blockquote><p>&#8230;it is very likely that within 3000 years  (120 generations) we have all sustained two or more mutations harmful to our intellectual or emotional stability.</p></blockquote>
<p>In his estimation, then, harmful mutations have collected over the years, reducing our intellectual ability. But why hasn&#8217;t natural selection weeded them out? He answers that in the second part of his two-part series.<a name="f3"></a><a href="#r3"><sup>3</sup></a> He suggests that once we started living in high-density societies, catching diseases from other people was much more likely to cause someone to die than were intellectual deficiencies. As a result, natural selection worked mostly on the genes that govern our immune systems, not on the genes that governed our intellectual abilities. In addition, societies tend to make people who are intellectually deficient more survivable, because a society can &#8220;find a place&#8221; for those who would probably die on their own. This sheltered people from the effects of natural selection when it came to intellectual deficiencies. As a result, natural selection could not get rid of the mutations related to intelligence; thus, people simply aren&#8217;t as intelligent now as they were 3,000 years ago.</p>
<p>While the good doctor&#8217;s proposal is an interesting one, I am not sure he makes his case. Indeed, in the same journal, another geneticist (Dr. Kevin J. Mitchell) argues against his position, pointing out studies that seem to indicate that intelligence-related genes are not sustaining a high mutation load. He also argues that the complex social interactions used in societies actually produce increased intelligence in future generations.<a name="f4"></a><a href="#r4"><sup>4</sup></a> As he concludes:</p>
<blockquote><p>Thus, despite ready counter-examples from nightly newscasts, there is no scientific reason to think that we humans are on an inevitable genetic trajectory towards idiocy.</p></blockquote>
<p>I honestly don&#8217;t know who has the better arguments here. I do think that Adam and Eve had mutation-free genomes, which would tend to imply that <em>everything</em> about them was better than we are today. At the same time, however, the Creator has designed our genomes to be adaptive, allowing the human population to change over time to meet our changing needs. As a result, even if we are carrying around some mutations in our intelligence-related genes, it&#8217;s not clear that we are significantly less intelligent than our ancient ancestors.</p>
<p>I do hope that more research is done on this question, because I find it incredibly interesting. If nothing else, I hope it helps to dispel the absurd notion that ancient people were intellectually inferior to us!</p>
<h2>REFERENCES</h2>
<p><a name="r1"></a>1. Kelly Trumble, <em>The Library of Alexandria</em>, Clarion books 2003, p. 24<br />
<a href="#f1">Return to Text</a></p>
<p><a name="r2"></a>2. Gerald R. Crabtree, &#8220;Our fragile intellect. Part I,&#8221; <em>Trends in Genetics</em>, 2013, <a href="http://download.cell.com/trends/genetics/pdf/PIIS0168952512001588.pdf">http://dx.doi:10.1016/j.tig.2012.10.002</a><br />
<a href="#f2">Return to Text</a></p>
<p><a name="r3"></a>3. Gerald R. Crabtree, &#8220;Our fragile intellect. Part II,&#8221; <em>Trends in Genetics</em>, 2013, <a href="http://download.cell.com/trends/genetics/pdf/PIIS016895251200159X.pdf">http://dx.doi:10.1016/j.tig.2012.10.003</a><br />
<a href="#f3">Return to Text</a></p>
<p><a name="r4"></a>4. Kevin J. Mitchell, &#8220;Genetic entropy and the human intellect,&#8221; <em>Trends in Genetics</em>, 2013, <a href="http://download.cell.com/trends/genetics/pdf/PIIS0168952512001941.pdf">http://dx.doi:10.1016/j.tig.2012.11.010</a><br />
<a href="#f4">Return to Text</a></p>
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